Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs2222754 chr16:31685450 T/C 4.55E-5 522 26.07 43.17 39.7 KM Plot
KIRC rs2229554 chr10:81927059 C/T 2.2E-6 520 38.88 50.07 3.93 KM Plot
KIRC rs2237228 chr6:26104630 C/T 9.07E-9 513 41.27 36.87 3.37 KM Plot
KIRC rs2245173 chr6:50810540 T/C 4.38E-6 521 41 40 15.3 KM Plot
KIRC rs2270069 chr7:148112119 A/G 6.01E-6 527 39.25 40 37.62 KM Plot
KIRC rs2282296 chr1:152487979 C/T 5.83E-5 510 33.8 44.67 37.9 KM Plot
KIRC rs2298694 chr21:47650362 C/T 2.05E-11 519 39.2 45.55 7.4 KM Plot
KIRC rs2307798 chr2:6629696 T/TTTATTTTCCAA 1.83E-5 526 10.97 46.43 38.93 KM Plot
KIRC rs2328380 chr6:20279412 A/G 7.72E-9 523 9.02 35.7 43.43 KM Plot
KIRC rs2510072 chr1:23769674 A/G 3.2E-8 523 3.3 36.12 40.93 KM Plot
KIRC rs2513090 chr11:125332704 G/A 4.68E-6 511 42.47 36.37 1.43 KM Plot
KIRC rs2516438 chr6:31417437 T/C 8.6E-6 525 38.83 45.85 1.88 KM Plot
KIRC rs2516444 chr6:31393136 C/A 8.1E-6 524 38.83 45.93 1.88 KM Plot
KIRC rs2516467 chr6:31413798 T/C 8.6E-6 525 38.83 45.85 1.88 KM Plot
KIRC rs2524276 chr6:31408265 C/A 8.27E-6 524 38.83 45.93 1.88 KM Plot